Molecule Viewer has an advanced control panel that allows you to control the 3D rotation and scale of the molecule. Also selectively show any atom type, and dynamically load the molecule XML files.
Show text "markers" next to each atom to indicate the type. Markers are scaled according to the atom size.
Atoms that are farther away are displayed using greater _alpha transparency, to enhance the 3D perspective of the molecule. You can easily set the maximum level of transparency using the XML configuration file.
Easily create additional XML files for more molecules by specifying the atom coordinates, radius, and color. Also specify stage properties like background color, and zoom settings.
100% of the Flash 2004 Pro source code is included! If you can't do something with the XML files, you can probably do it yourself by directly editing the Flash source code (requires knowledge of Flash Actionscript).
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